MODULE ocean_control_mod ! !svn $Id: obs_sen_w4dpsas.h 937 2019-01-28 06:13:04Z arango $ !================================================== Hernan G. Arango === ! Copyright (c) 2002-2019 The ROMS/TOMS Group Andrew M. Moore ! ! Licensed under a MIT/X style license ! ! See License_ROMS.txt ! !======================================================================= ! ! ! ROMS/TOMS Strong/Weak Constraint 4-Dimensional Variational Data ! ! Assimilation and Observation Sensitivity Driver: Physical-space ! ! Statistical Analysis System (4D-PSAS). ! ! Dual formulation in observarion space. ! ! ! ! This driver is used for weak constraint 4D-Var where errors are ! ! considered in both model and observations. It also computes the ! ! the sensitivity of the assimilation system to each observation. ! ! It measures the degree to which each observation contributes to ! ! the uncertainty in the estimate. This analysis can be used to ! ! determine the type of measurements that need to be made, where ! ! to observe, and when. ! ! ! ! The routines in this driver control the initialization, time- ! ! stepping, and finalization of ROMS/TOMS model following ESMF ! ! conventions: ! ! ! ! ROMS_initialize ! ! ROMS_run ! ! ROMS_finalize ! ! ! ! References: ! ! ! ! Moore, A.M., H.G. Arango, G. Broquet, B.S. Powell, A.T. Weaver, ! ! and J. Zavala-Garay, 2011: The Regional Ocean Modeling System ! ! (ROMS) 4-dimensional variational data assimilations systems, ! ! Part I - System overview and formulation, Prog. Oceanogr., 91, ! ! 34-49, doi:10.1016/j.pocean.2011.05.004. ! ! ! ! Moore, A.M., H.G. Arango, G. Broquet, C. Edward, M. Veneziani, ! ! B. Powell, D. Foley, J.D. Doyle, D. Costa, and P. Robinson, ! ! 2011: The Regional Ocean Modeling System (ROMS) 4-dimensional ! ! variational data assimilations systems, Part II - Performance ! ! and application to the California Current System, Prog. ! ! Oceanogr., 91, 50-73, doi:10.1016/j.pocean.2011.05.003. ! ! ! ! Moore, A.M., H.G. Arango, G. Broquet, C. Edward, M. Veneziani, ! ! B. Powell, D. Foley, J.D. Doyle, D. Costa, and P. Robinson, ! ! 2011: The Regional Ocean Modeling System (ROMS) 4-dimensional ! ! variational data assimilations systems, Part III - Observation ! ! impact and observation sensitivity in the California Current ! ! System, Prog. Oceanogr., 91, 74-94, ! ! doi:10.1016/j.pocean.2011.05.005. ! ! ! !======================================================================= ! implicit none PRIVATE PUBLIC :: ROMS_initialize PUBLIC :: ROMS_run PUBLIC :: ROMS_finalize CONTAINS SUBROUTINE ROMS_initialize (first, mpiCOMM) ! !======================================================================= ! ! ! This routine allocates and initializes ROMS/TOMS state variables ! ! and internal and external parameters. ! ! ! !======================================================================= ! USE mod_param USE mod_parallel USE mod_fourdvar USE mod_iounits #ifdef SKIP_NLM USE mod_ncparam #endif USE mod_netcdf USE mod_scalars ! #ifdef MCT_LIB # ifdef ATM_COUPLING USE ocean_coupler_mod, ONLY : initialize_ocn2atm_coupling # endif # ifdef WAV_COUPLING USE ocean_coupler_mod, ONLY : initialize_ocn2wav_coupling # endif #endif USE strings_mod, ONLY : FoundError ! ! Imported variable declarations. ! logical, intent(inout) :: first integer, intent(in), optional :: mpiCOMM ! ! Local variable declarations. ! logical :: allocate_vars = .TRUE. #ifdef DISTRIBUTE integer :: MyError, MySize #endif integer :: STDrec, Tindex integer :: chunk_size, ng, thread #ifdef _OPENMP integer :: my_threadnum #endif #ifdef DISTRIBUTE ! !----------------------------------------------------------------------- ! Set distribute-memory (mpi) world communictor. !----------------------------------------------------------------------- ! IF (PRESENT(mpiCOMM)) THEN OCN_COMM_WORLD=mpiCOMM ELSE OCN_COMM_WORLD=MPI_COMM_WORLD END IF CALL mpi_comm_rank (OCN_COMM_WORLD, MyRank, MyError) CALL mpi_comm_size (OCN_COMM_WORLD, MySize, MyError) #endif ! !----------------------------------------------------------------------- ! On first pass, initialize model parameters a variables for all ! nested/composed grids. Notice that the logical switch "first" ! is used to allow multiple calls to this routine during ensemble ! configurations. !----------------------------------------------------------------------- ! IF (first) THEN first=.FALSE. ! ! Initialize parallel control switches. These scalars switches are ! independent from standard input parameters. ! CALL initialize_parallel ! ! Read in model tunable parameters from standard input. Allocate and ! initialize variables in several modules after the number of nested ! grids and dimension parameters are known. ! CALL inp_par (iNLM) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN ! ! Set domain decomposition tile partition range. This range is ! computed only once since the "first_tile" and "last_tile" values ! are private for each parallel thread/node. ! !$OMP PARALLEL #if defined _OPENMP MyThread=my_threadnum() #elif defined DISTRIBUTE MyThread=MyRank #else MyThread=0 #endif DO ng=1,Ngrids chunk_size=(NtileX(ng)*NtileE(ng)+numthreads-1)/numthreads first_tile(ng)=MyThread*chunk_size last_tile (ng)=first_tile(ng)+chunk_size-1 END DO !$OMP END PARALLEL ! ! Initialize internal wall clocks. Notice that the timings does not ! includes processing standard input because several parameters are ! needed to allocate clock variables. ! IF (Master) THEN WRITE (stdout,10) 10 FORMAT (/,' Process Information:',/) END IF ! DO ng=1,Ngrids !$OMP PARALLEL DO thread=THREAD_RANGE CALL wclock_on (ng, iNLM, 0, __LINE__, __FILE__) END DO !$OMP END PARALLEL END DO ! ! Allocate and initialize modules variables. ! !$OMP PARALLEL CALL mod_arrays (allocate_vars) !$OMP END PARALLEL ! ! Allocate and initialize observation arrays. ! CALL initialize_fourdvar END IF #if defined MCT_LIB && (defined ATM_COUPLING || defined WAV_COUPLING) ! !----------------------------------------------------------------------- ! Initialize coupling streams between model(s). !----------------------------------------------------------------------- ! DO ng=1,Ngrids # ifdef ATM_COUPLING CALL initialize_ocn2atm_coupling (ng, MyRank) # endif # ifdef WAV_COUPLING CALL initialize_ocn2wav_coupling (ng, MyRank) # endif END DO #endif #if !defined RECOMPUTE_4DVAR ! !----------------------------------------------------------------------- ! If the required vectors and arrays from congrad from a previous ! run of the assimilation cycle are available, read them here from ! LCZ(ng)%name NetCDF file. !----------------------------------------------------------------------- ! SourceFile=__FILE__ // ", ROMS_initialize" DO ng=1,Ngrids CALL netcdf_get_fvar (ng, iTLM, LCZ(ng)%name, 'cg_beta', & & cg_beta) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN CALL netcdf_get_fvar (ng, iTLM, LCZ(ng)%name, 'cg_delta', & & cg_delta) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN CALL netcdf_get_fvar (ng, iTLM, LCZ(ng)%name, 'cg_Gnorm_v', & & cg_Gnorm_v) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN CALL netcdf_get_fvar (ng, iTLM, LCZ(ng)%name, 'cg_dla', & & cg_dla) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN CALL netcdf_get_fvar (ng, iTLM, LCZ(ng)%name, 'cg_QG', & & cg_QG) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN CALL netcdf_get_fvar (ng, iTLM, LCZ(ng)%name, 'zgrad0', & & zgrad0) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN CALL netcdf_get_fvar (ng, iTLM, LCZ(ng)%name, 'zcglwk', & & zcglwk) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN CALL netcdf_get_fvar (ng, iTLM, LCZ(ng)%name, 'TLmodVal_S', & & TLmodVal_S, & & broadcast = .FALSE.) ! Master use only IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO #endif #ifdef SKIP_NLM ! !----------------------------------------------------------------------- ! If skiping runing nonlinear model, read in observation screening and ! quality control flag. !----------------------------------------------------------------------- ! SourceFile=__FILE__ // ", ROMS_initialize" wrtObsScale(1:Ngrids)=.FALSE. DO ng=1,Ngrids CALL netcdf_get_fvar (ng, iTLM, LCZ(ng)%name, Vname(1,idObsS), & & ObsScale) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO #endif ! !----------------------------------------------------------------------- ! Read in standard deviation factors for error covariance. !----------------------------------------------------------------------- ! ! Initial conditions standard deviation. They are loaded in Tindex=1 ! of the e_var(...,Tindex) state variables. ! STDrec=1 Tindex=1 DO ng=1,Ngrids CALL get_state (ng, 10, 10, STD(1,ng)%name, STDrec, Tindex) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! ! Model error standard deviation. They are loaded in Tindex=2 ! of the e_var(...,Tindex) state variables. ! STDrec=1 Tindex=2 IF (NSA.eq.2) THEN DO ng=1,Ngrids CALL get_state (ng, 11, 11, STD(2,ng)%name, STDrec, Tindex) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO END IF #ifdef ADJUST_BOUNDARY ! ! Open boundary conditions standard deviation. ! STDrec=1 Tindex=1 DO ng=1,Ngrids CALL get_state (ng, 12, 12, STD(3,ng)%name, STDrec, Tindex) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO #endif #if defined ADJUST_WSTRESS || defined ADJUST_STFLUX ! ! Surface forcing standard deviation. ! STDrec=1 Tindex=1 DO ng=1,Ngrids CALL get_state (ng, 13, 13, STD(4,ng)%name, STDrec, Tindex) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO #endif RETURN END SUBROUTINE ROMS_initialize SUBROUTINE ROMS_run (RunInterval) ! !======================================================================= ! ! ! This routine time-steps ROMS/TOMS nonlinear, tangent linear and ! ! adjoint models. ! ! ! !======================================================================= ! USE mod_param USE mod_parallel USE mod_fourdvar USE mod_iounits USE mod_ncparam USE mod_netcdf USE mod_scalars USE mod_stepping ! USE convolve_mod, ONLY : error_covariance #ifdef ADJUST_BOUNDARY USE mod_boundary, ONLY : initialize_boundary #endif USE mod_forces, ONLY : initialize_forces USE mod_ocean, ONLY : initialize_ocean USE normalization_mod, ONLY : normalization USE strings_mod, ONLY : FoundError, uppercase #if defined BALANCE_OPERATOR && defined ZETA_ELLIPTIC USE zeta_balance_mod, ONLY : balance_ref, biconj #endif ! ! Imported variable declarations ! real(dp), intent(in) :: RunInterval ! seconds ! ! Local variable declarations. ! logical :: Lcgini, Linner, Lposterior integer :: my_inner, my_outer integer :: Lbck, Lini, Rec1, Rec2 integer :: i, ng, status, tile integer :: Fcount, NRMrec integer, dimension(Ngrids) :: indxSave integer, dimension(Ngrids) :: Nrec real(r8) :: str_day, end_day character (len=15) :: driver character (len=20) :: string ! !======================================================================= ! Run model for all nested grids, if any. !======================================================================= ! ! Initialize relevant parameters. ! DO ng=1,Ngrids #if defined ADJUST_STFLUX || defined ADJUST_WSTRESS Lfinp(ng)=1 ! forcing index for input Lfout(ng)=1 ! forcing index for output history files #endif #ifdef ADJUST_BOUNDARY Lbinp(ng)=1 ! boundary index for input Lbout(ng)=1 ! boundary index for output history files #endif Lold(ng)=1 ! old minimization time index Lnew(ng)=2 ! new minimization time index END DO Lini=1 ! NLM initial conditions record in INI Lbck=2 ! background record in INI Rec1=1 Rec2=2 Nrun=1 outer=0 inner=0 ERstr=1 ERend=Nouter driver='obs_sen_w4dpsas' ! !----------------------------------------------------------------------- ! Configure weak constraint 4DVAR algorithm: PSAS Approach. !----------------------------------------------------------------------- ! ! Initialize the switch to gather weak constraint forcing. ! DO ng=1,Ngrids WRTforce(ng)=.FALSE. END DO ! ! Initialize and set nonlinear model initial conditions. ! DO ng=1,Ngrids wrtNLmod(ng)=.TRUE. wrtRPmod(ng)=.FALSE. wrtTLmod(ng)=.FALSE. END DO !$OMP PARALLEL CALL initial !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN ! ! Save nonlinear initial conditions (currently in time index 1, ! background) into record "Lbck" of INI(ng)%name NetCDF file. The ! record "Lbck" becomes the background state record and the record ! "Lini" becomes current nonlinear initial conditions. ! DO ng=1,Ngrids INI(ng)%Rindex=1 Fcount=INI(ng)%Fcount INI(ng)%Nrec(Fcount)=1 CALL wrt_ini (ng, 1) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! ! Set nonlinear output history file as the initial basic state ! trajectory for the specified outer loop (Nimpact) used in the ! observation impact/sensitivity analysis. ! DO ng=1,Ngrids LdefHIS(ng)=.TRUE. LwrtHIS(ng)=.TRUE. WRITE (HIS(ng)%name,10) TRIM(FWD(ng)%base), Nimpact-1 END DO #if defined BULK_FLUXES && defined NL_BULK_FLUXES ! ! Set file name containing the nonlinear model bulk fluxes to be read ! and processed by other algorithms. ! DO ng=1,Ngrids BLK(ng)%name=HIS(ng)%name END DO #endif ! !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! Model-error covariance normalization and stardard deviation factors. !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! ! Compute or read in the error covariance normalization factors. ! If computing, write out factors to NetCDF. This is an expensive ! computation that needs to be computed only once for a particular ! application grid and decorrelation scales. ! DO ng=1,Ngrids IF (ANY(LwrtNRM(:,ng))) THEN CALL def_norm (ng, iNLM, 1) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN IF (NSA.eq.2) THEN CALL def_norm (ng, iNLM, 2) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END IF #ifdef ADJUST_BOUNDARY CALL def_norm (ng, iNLM, 3) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN #endif #if defined ADJUST_WSTRESS || defined ADJUST_STFLUX CALL def_norm (ng, iNLM, 4) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN #endif !$OMP PARALLEL DO tile=first_tile(ng),last_tile(ng),+1 CALL normalization (ng, tile, 2) END DO !$OMP END PARALLEL LdefNRM(1:4,ng)=.FALSE. LwrtNRM(1:4,ng)=.FALSE. ELSE NRMrec=1 CALL get_state (ng, 14, 14, NRM(1,ng)%name, NRMrec, 1) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN IF (NSA.eq.2) THEN CALL get_state (ng, 15, 15, NRM(2,ng)%name, NRMrec, 2) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END IF #ifdef ADJUST_BOUNDARY CALL get_state (ng, 16, 16, NRM(3,ng)%name, NRMrec, 1) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN #endif #if defined ADJUST_WSTRESS || defined ADJUST_STFLUX CALL get_state (ng, 17, 17, NRM(4,ng)%name, NRMrec, 1) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN #endif END IF END DO #if !defined RECOMPUTE_4DVAR && defined BALANCE_OPERATOR && \ defined ZETA_ELLIPTIC ! ! Compute the reference zeta and biconjugate gradient arrays ! required for the balance of free surface. ! IF (balance(isFsur)) THEN DO ng=1,Ngrids CALL get_state (ng, iNLM, 2, INI(ng)%name, Lini, Lini) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN ! !$OMP PARALLEL DO tile=first_tile(ng),last_tile(ng),+1 CALL balance_ref (ng, tile, Lini) CALL biconj (ng, tile, iNLM, Lini) END DO !$OMP END PARALLEL wrtZetaRef(ng)=.TRUE. END DO END IF #endif ! ! Define tangent linear initial conditions file. ! DO ng=1,Ngrids LdefITL(ng)=.TRUE. CALL tl_def_ini (ng) LdefITL(ng)=.FALSE. IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! ! Define impulse forcing NetCDF file. ! DO ng=1,Ngrids LdefTLF(ng)=.TRUE. CALL def_impulse (ng) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! ! Define output 4DVAR NetCDF file containing all processed data ! at observation locations. ! DO ng=1,Ngrids LdefMOD(ng)=.TRUE. CALL def_mod (ng) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! ! Write out outer loop beeing processed. ! SourceFile=__FILE__ // ", ROMS_run" DO ng=1,Ngrids CALL netcdf_put_ivar (ng, iNLM, DAV(ng)%name, 'Nimpact', & & Nimpact, (/0/), (/0/), & & ncid = DAV(ng)%ncid) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO #ifndef SKIP_NLM ! !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! Run nonlinear model and compute background state trajectory, X_n-1(t) ! and the background values at the observation points and times. It ! processes and writes the observations accept/reject flag (ObsScale) ! once to allow background quality control, if any. !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! DO ng=1,Ngrids wrtObsScale(ng)=.TRUE. SporadicImpulse(ng)=.FALSE. FrequentImpulse(ng)=.FALSE. IF (Master) THEN WRITE (stdout,20) 'NL', ng, ntstart(ng), ntend(ng) END IF END DO !$OMP PARALLEL # ifdef SOLVE3D CALL main3d (RunInterval) # else CALL main2d (RunInterval) # endif !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN DO ng=1,Ngrids wrtNLmod(ng)=.FALSE. wrtObsScale(ng)=.FALSE. END DO ! ! Report data penalty function. ! DO ng=1,Ngrids IF (Master) THEN DO i=0,NobsVar(ng) IF (i.eq.0) THEN string='Total' ELSE string=ObsName(i) END IF IF (FOURDVAR(ng)%NLPenalty(i).ne.0.0_r8) THEN WRITE (stdout,30) outer, inner, 'NLM', & & FOURDVAR(ng)%NLPenalty(i), & & TRIM(string) END IF END DO END IF ! ! Write out initial data penalty function to NetCDF file. ! SourceFile=__FILE__ // ", ROMS_run" CALL netcdf_put_fvar (ng, iNLM, DAV(ng)%name, & & 'NL_iDataPenalty', & & FOURDVAR(ng)%NLPenalty(0:), & & (/1/), (/NobsVar(ng)+1/), & & ncid = DAV(ng)%ncid) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN ! ! Clean penalty array before next run of NL model. ! FOURDVAR(ng)%NLPenalty=0.0_r8 END DO #endif /* !SKIP_NLM */ ! ! Set forward basic state NetCDF ID to nonlinear model trajectory to ! avoid the inquiring stage. ! DO ng=1,Ngrids FWD(ng)%ncid=HIS(ng)%ncid END DO #ifdef RECOMPUTE_4DVAR ! !----------------------------------------------------------------------- ! Solve the system (following Courtier, 1997): ! ! (H M_n B (M_n)' H' + Cobs) * w_n = d_n ! ! d_n = yo - H * Xb_n ! ! where M_n is the tangent linear model matrix, Cobs is the ! observation-error covariance, B is the background error covariance ! and dx_n=B M' H' w_n is the analysis increment so that Xa=Xb+dx_n. ! d_n is the misfit between observations (yo) and model (H * Xb_n), ! and H is the linearized observation operator. ! ! Here, _n denotes a sequence of outer-loop estimates. ! ! The system does not need to be solved explicitly by inverting the ! symmetric matrix, P_n: ! ! P_n = H M_n B (M_n)' H' + Cobs ! ! but by computing the action of P_n on any vector PSI, such that ! ! P_n * PSI = H M_n B (M_n)' H' * PSI + Cobs * PSI ! ! The (H M_n B (M_n)' H') matrix is not explicitly computed but ! evaluated by one integration backward of the adjoint model and ! one integration forward of the tangent linear model for any ! forcing vector PSI. ! ! A preconditioned conjugate gradient algorithm is used to compute ! an approximation PSI for w_n. ! !----------------------------------------------------------------------- ! ! If the required vectors and arrays from congrad from a previous run ! of the assimilation cycle are not available, rerun the 4D-Var cycle. ! OUTER_LOOP : DO my_outer=1,Nouter outer=my_outer inner=0 ! ! Set basic state trajectory (X_n-1) file to previous outer loop file ! (outer-1). ! DO ng=1,Ngrids WRITE (FWD(ng)%name,10) TRIM(FWD(ng)%base), outer-1 END DO ! ! Clear tangent linear forcing arrays before entering inner-loop. ! This is very important since these arrays are non-zero and must ! be zero when running the tangent linear model. ! DO ng=1,Ngrids !$OMP PARALLEL DO tile=first_tile(ng),last_tile(ng),+1 CALL initialize_forces (ng, tile, iTLM) # ifdef ADJUST_BOUNDARY CALL initialize_boundary (ng, tile, iTLM) # endif END DO !$OMP END PARALLEL END DO # if defined BALANCE_OPERATOR && defined ZETA_ELLIPTIC ! ! Compute the reference zeta and biconjugate gradient arrays ! required for the balance of free surface. ! IF (balance(isFsur)) THEN DO ng=1,Ngrids CALL get_state (ng, iNLM, 2, INI(ng)%name, Lini, Lini) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN ! !$OMP PARALLEL DO tile=first_tile(ng),last_tile(ng),+1 CALL balance_ref (ng, tile, Lini) CALL biconj (ng, tile, iNLM, Lini) END DO !$OMP END PARALLEL wrtZetaRef(ng)=.TRUE. END DO END IF # endif ! INNER_LOOP : DO my_inner=0,Ninner inner=my_inner ! ! Initialize conjugate gradient algorithm depending on hot start or ! outer loop index. ! IF (inner.eq.0) THEN Lcgini=.TRUE. DO ng=1,Ngrids CALL congrad (ng, iRPM, outer, inner, Ninner, Lcgini) END DO END IF ! ! If initialization step, skip the inner-loop computations. ! Linner=.FALSE. IF ((inner.ne.0).or.(Nrun.ne.1)) THEN IF (((inner.eq.0).and.LhotStart).or.(inner.ne.0)) THEN Linner=.TRUE. END IF END IF ! ! Start inner loop computations. ! INNER_COMPUTE : IF (Linner) THEN ! !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! Integrate adjoint model forced with any vector PSI at the observation ! locations and generate adjoint trajectory, Lambda_n(t). !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! ! Initialize the adjoint model from rest. ! DO ng=1,Ngrids LsenPSAS(ng)=.FALSE. !$OMP PARALLEL CALL ad_initial (ng) !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN wrtMisfit(ng)=.FALSE. END DO ! ! Set adjoint history NetCDF parameters. Define adjoint history ! file only once to avoid opening too many files. ! DO ng=1,Ngrids WRTforce(ng)=.TRUE. IF (Nrun.gt.1) LdefADJ(ng)=.FALSE. Fcount=ADM(ng)%Fcount ADM(ng)%Nrec(Fcount)=0 ADM(ng)%Rindex=0 END DO ! ! Time-step adjoint model backwards forced with current PSI vector. ! DO ng=1,Ngrids IF (Master) THEN WRITE (stdout,20) 'AD', ng, ntstart(ng), ntend(ng) END IF END DO !$OMP PARALLEL # ifdef SOLVE3D CALL ad_main3d (RunInterval) # else CALL ad_main2d (RunInterval) # endif !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN ! ! Write out last weak-constraint forcing (WRTforce is still .TRUE.) ! record into the adjoint history file. Note that the weak-constraint ! forcing is delayed by nADJ time-steps. ! DO ng=1,Ngrids CALL ad_wrt_his (ng) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! ! Write out adjoint initial condition record into the adjoint ! history file. ! DO ng=1,Ngrids WRTforce(ng)=.FALSE. CALL ad_wrt_his (ng) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! ! Convolve adjoint trajectory with error covariances. ! Lposterior=.FALSE. CALL error_covariance (iTLM, driver, outer, inner, & & Lbck, Lini, Lold, Lnew, & & Rec1, Rec2, Lposterior) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN ! ! Convert the current adjoint solution in ADM(ng)%name to impulse ! forcing. Write out impulse forcing into TLF(ng)%name NetCDF file. ! To facilitate the forcing to the TLM and RPM, the forcing is ! processed and written in increasing time coordinates (recall that ! the adjoint solution in ADM(ng)%name is backwards in time). ! IF (Master) THEN WRITE (stdout,40) outer, inner END IF DO ng=1,Ngrids TLF(ng)%Rindex=0 # ifdef DISTRIBUTE tile=MyRank # else tile=-1 # endif CALL wrt_impulse (ng, tile, iADM, ADM(ng)%name) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! Integrate tangent linear model forced by the convolved adjoint ! trajectory (impulse forcing) to compute R_n * PSI at observation ! points. !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! ! Initialize tangent linear model from initial impulse which is now ! stored in file ITL(ng)%name. ! DO ng=1,Ngrids wrtNLmod(ng)=.FALSE. wrtTLmod(ng)=.TRUE. END DO ! ! If weak constraint, the impulses are time-interpolated at each ! time-steps. ! DO ng=1,Ngrids IF (FrcRec(ng).gt.3) THEN FrequentImpulse(ng)=.TRUE. END IF END DO ! ! Initialize tangent linear model from ITL(ng)%name, record Rec1. ! DO ng=1,Ngrids ITL(ng)%Rindex=Rec1 !$OMP PARALLEL CALL tl_initial (ng) !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! ! Activate switch to write out initial misfit between model and ! observations. ! IF ((outer.eq.1).and.(inner.eq.1)) THEN DO ng=1,Ngrids wrtMisfit(ng)=.TRUE. END DO END IF ! ! Run tangent linear model forward and force with convolved adjoint ! trajectory impulses. Compute (H M B M' H')_n * PSI at observation ! points which are used in the conjugate gradient algorithm. ! DO ng=1,Ngrids IF (Master) THEN WRITE (stdout,20) 'TL', ng, ntstart(ng), ntend(ng) END IF END DO !$OMP PARALLEL # ifdef SOLVE3D CALL tl_main3d (RunInterval) # else CALL tl_main2d (RunInterval) # endif !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN DO ng=1,Ngrids wrtNLmod(ng)=.FALSE. wrtTLmod(ng)=.FALSE. END DO ! !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! Use conjugate gradient algorithm to find a better approximation ! PSI to coefficients Beta_n. !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! Nrun=Nrun+1 DO ng=1,Ngrids Lcgini=.FALSE. CALL congrad (ng, iTLM, outer, inner, Ninner, Lcgini) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO END IF INNER_COMPUTE END DO INNER_LOOP ! !----------------------------------------------------------------------- ! Once the w_n, have been approximated with sufficient accuracy, ! compute estimates of Lambda_n and Xhat_n by carrying out one ! backward intergration of the adjoint model and one forward ! itegration of the nonlinear model. !----------------------------------------------------------------------- ! ! Initialize the adjoint model always from rest. ! DO ng=1,Ngrids LsenPSAS(ng)=.FALSE. !$OMP PARALLEL CALL ad_initial (ng) !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! ! Set adjoint history NetCDF parameters. Define adjoint history ! file one to avoid opening to many files. ! DO ng=1,Ngrids WRTforce(ng)=.TRUE. IF (Nrun.gt.1) LdefADJ(ng)=.FALSE. Fcount=ADM(ng)%Fcount ADM(ng)%Nrec(Fcount)=0 ADM(ng)%Rindex=0 END DO ! ! Time-step adjoint model backwards forced with estimated coefficients, ! Beta_n. ! DO ng=1,Ngrids IF (Master) THEN WRITE (stdout,20) 'AD', ng, ntstart(ng), ntend(ng) END IF END DO !$OMP PARALLEL # ifdef SOLVE3D CALL ad_main3d (RunInterval) # else CALL ad_main2d (RunInterval) # endif !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN ! ! Write out last weak-constraint forcing (WRTforce is still .TRUE.) ! record into the adjoint history file. Note that the weak-constraint ! forcing is delayed by nADJ time-steps. ! DO ng=1,Ngrids CALL ad_wrt_his (ng) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! ! Write out adjoint initial condition record into the adjoint ! history file. ! DO ng=1,Ngrids WRTforce(ng)=.FALSE. CALL ad_wrt_his (ng) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! ! Convolve adjoint trajectory with error covariances. ! Lposterior=.FALSE. CALL error_covariance (iNLM, driver, outer, inner, & & Lbck, Lini, Lold, Lnew, & & Rec1, Rec2, Lposterior) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN ! ! Convert the current adjoint solution in ADM(ng)%name to impulse ! forcing. Write out impulse forcing into TLF(ng)%name NetCDF file. ! To facilitate the forcing to the TLM and RPM, the forcing is ! processed and written in increasing time coordinates (recall that ! the adjoint solution in ADM(ng)%name is backwards in time). ! IF (Master) THEN WRITE (stdout,40) outer, inner END IF DO ng=1,Ngrids TLF(ng)%Rindex=0 # ifdef DISTRIBUTE tile=MyRank # else tile=-1 # endif CALL wrt_impulse (ng, tile, iADM, ADM(ng)%name) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! Run nonlinear model and compute a "new estimate" of the state ! trajectory, X_n(t). !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! ! Set new basic state trajectory for next outer loop. ! DO ng=1,Ngrids LdefHIS(ng)=.TRUE. LwrtHIS(ng)=.TRUE. wrtNLmod(ng)=.TRUE. wrtTLmod(ng)=.FALSE. WRITE (HIS(ng)%name,10) TRIM(FWD(ng)%base), outer END DO ! ! If weak constraint, the impulses are time-interpolated at each ! time-steps. ! DO ng=1,Ngrids IF (FrcRec(ng).gt.3) THEN FrequentImpulse(ng)=.TRUE. END IF END DO ! ! Clear tangent arrays before running nonlinear model (important). ! DO ng=1,Ngrids !$OMP PARALLEL DO tile=first_tile(ng),last_tile(ng),+1 CALL initialize_ocean (ng, tile, iTLM) CALL initialize_forces (ng, tile, iTLM) # ifdef ADJUST_BOUNDARY CALL initialize_boundary (ng, tile, iTLM) # endif END DO !$OMF END PARALLEL END DO ! ! Initialize nonlinear model INI(ng)%name file, record outer+2. ! Notice that NetCDF record index counter is saved because this ! counter is used to write initial conditions. ! DO ng=1,Ngrids indxSave(ng)=INI(ng)%Rindex INI(ng)%Rindex=outer+2 END DO !$OMP PARALLEL CALL initial !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN DO ng=1,Ngrids INI(ng)%Rindex=indxSave(ng) END DO ! ! Activate switch to write out final misfit between model and ! observations. ! IF (outer.eq.Nouter) THEN DO ng=1,Ngrids wrtMisfit(ng)=.TRUE. END DO END IF ! ! Run nonlinear forced by convolved adjoint trajectory impulses and ! compute new basic state trajectory X_n. ! DO ng=1,Ngrids IF (Master) THEN WRITE (stdout,20) 'NL', ng, ntstart(ng), ntend(ng) END IF END DO !$OMP PARALLEL # ifdef SOLVE3D CALL main3d (RunInterval) # else CALL main2d (RunInterval) # endif !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN DO ng=1,Ngrids wrtNLmod(ng)=.FALSE. wrtTLmod(ng)=.FALSE. END DO ! ! Report data penalty function. ! DO ng=1,Ngrids IF (Master) THEN DO i=0,NobsVar(ng) IF (i.eq.0) THEN string='Total' ELSE string=ObsName(i) END IF IF (FOURDVAR(ng)%NLPenalty(i).ne.0.0_r8) THEN WRITE (stdout,30) outer, inner, 'NLM', & & FOURDVAR(ng)%NLPenalty(i), & & TRIM(string) END IF END DO END IF ! ! Write out final data penalty function to NetCDF file. ! SourceFile=__FILE__ // ", ROMS_run" CALL netcdf_put_fvar (ng, iNLM, DAV(ng)%name, & & 'NL_fDataPenalty', & & FOURDVAR(ng)%NLPenalty(0:), & & (/1,outer/), (/NobsVar(ng)+1,1/), & & ncid = DAV(ng)%ncid) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN ! ! Clean penalty array before next run of NL model. ! FOURDVAR(ng)%NLPenalty=0.0_r8 END DO ! ! Close current forward NetCDF file. ! DO ng=1,Ngrids CALL netcdf_close (ng, iNLM, FWD(ng)%ncid) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO END DO OUTER_LOOP #endif /* RECOMPUTE_4DVAR */ ! ! Done. Set history file ID to closed state since we manipulated ! its indices with the forward file ID which was closed above. ! DO ng=1,Ngrids HIS(ng)%ncid=-1 END DO !! !! Compute and report model-observation comparison statistics. !! !! DO ng=1,Ngrids !! CALL stats_modobs (ng) !! IF (FoundError(exit_flag, NoError, __LINE__, & !! & __FILE__)) RETURN !! END DO ! !~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ !~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ! Adjoint of 4D-PSAS to compute the observation sensitivity. !~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ !~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ! ! Reset the start and end times for the adjoint forcing. ! DO ng=1,Ngrids #ifdef SKIP_NLM str_day=tdays(ng)+ntimes(ng)*dt(ng)*sec2day end_day=tdays(ng) #else str_day=tdays(ng) end_day=str_day-ntimes(ng)*dt(ng)*sec2day #endif IF ((DstrS(ng).eq.0.0_r8).and.(DendS(ng).eq.0.0_r8)) THEN DstrS(ng)=end_day DendS(ng)=str_day END IF IF (Master) THEN WRITE (stdout,70) 'AD', DendS(ng), DstrS(ng) END IF END DO ! ! WARNING: ONLY one outer loop can be used for this application. ! ======= For more than 1 outer-loop, we require the second ! derivative of each model operator (i.e. the tangent linear ! of the tangent linear operator). ! AD_OUTER_LOOP : DO my_outer=Nimpact,Nimpact outer=my_outer inner=0 ! !----------------------------------------------------------------------- ! Run the adjoint model initialized and forced by dI/dx where I is the ! chosen function of the analysis/forecast state x. !----------------------------------------------------------------------- ! ! Set basic state trajectory. ! DO ng=1,Ngrids WRITE (FWD(ng)%name,10) TRIM(FWD(ng)%base), outer-1 END DO IF (Master) THEN WRITE (stdout,50) END IF ! ! Initialize the adjoint model: initialize using dI/dxf is ! appropriate. ! DO ng=1,Ngrids Lstiffness=.FALSE. LsenPSAS(ng)=.TRUE. !$OMP PARALLEL CALL ad_initial (ng) !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! ! Set adjoint history NetCDF parameters. Define adjoint history ! file one to avoid opening to many files. ! DO ng=1,Ngrids WRTforce=.TRUE. IF (Nrun.gt.1) LdefADJ(ng)=.FALSE. Fcount=ADM(ng)%Fcount ADM(ng)%Nrec(Fcount)=0 ADM(ng)%Rindex=0 END DO ! ! Time-step adjoint model backwards. ! ??? What do we do in the case of model error? Save forcing for TLM? ! DO ng=1,Ngrids IF (Master) THEN WRITE (stdout,20) 'AD', ng, ntstart(ng), ntend(ng) END IF END DO !$OMP PARALLEL #ifdef SOLVE3D CALL ad_main3d (RunInterval) #else CALL ad_main2d (RunInterval) #endif !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN ! ! Write out last weak-constraint forcing (WRTforce is still .TRUE.) ! record into the adjoint history file. Note that the weak-constraint ! forcing is delayed by nADJ time-steps. ! DO ng=1,Ngrids CALL ad_wrt_his (ng) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! ! Write out adjoint initial condition record into the adjoint ! history file. ! DO ng=1,Ngrids WRTforce(ng)=.FALSE. CALL ad_wrt_his (ng) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! ! Convolve adjoint trajectory with error covariances. ! Lposterior=.FALSE. CALL error_covariance (iTLM, driver, outer, inner, & & Lbck, Lini, Lold, Lnew, & & Rec1, Rec2, Lposterior) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN ! ! Convert the current adjoint solution in ADM(ng)%name to impulse ! forcing. Write out impulse forcing into TLF(ng)%name NetCDF file. ! To facilitate the forcing to the TLM and RPM, the forcing is ! processed and written in increasing time coordinates (recall that ! the adjoint solution in ADM(ng)%name is backwards in time). ! ! AMM: Do not know what to do in the weak constraint case yet. ! !! IF (Master) THEN !! WRITE (stdout,40) outer, inner !! END IF !! DO ng=1,Ngrids !! TLF(ng)%Rindex=0 #ifdef DISTRIBUTE !! tile=MyRank #else !! tile=-1 #endif !! CALL wrt_impulse (ng, tile, iADM, ADM(ng)%name) !! IF (FoundError(exit_flag, NoError, __LINE__, & !! & __FILE__)) RETURN !! END DO ! !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! Integrate tangent linear model forced by the convolved adjoint ! trajectory. !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! DO ng=1,Ngrids wrtNLmod(ng)=.FALSE. wrtTLmod(ng)=.TRUE. LwrtTLM(ng)=.FALSE. END DO ! ! Clear tangent linear forcing arrays before entering inner-loop. ! This is very important. ! DO ng=1,Ngrids !$OMP PARALLEL DO tile=first_tile(ng),last_tile(ng),+1 CALL initialize_forces (ng, tile, iTLM) #ifdef ADJUST_BOUNDARY CALL initialize_boundary (ng, tile, iTLM) #endif END DO !$OMP END PARALLEL END DO ! ! Set basic state trajectory. ! DO ng=1,Ngrids WRITE (FWD(ng)%name,10) TRIM(FWD(ng)%base), outer-1 END DO ! ! If weak constraint, the impulses are time-interpolated at each ! time-steps. ! DO ng=1,Ngrids IF (FrcRec(ng).gt.3) THEN FrequentImpulse(ng)=.TRUE. END IF END DO ! ! Initialize tangent linear model from ITL(ng)%name, record Rec1. ! DO ng=1,Ngrids ITL(ng)%Rindex=Rec1 !$OMP PARALLEL CALL tl_initial (ng) !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! ! Run tangent linear model forward and force with convolved adjoint ! trajectory impulses. Compute (HMBM'H')_n * PSI at observation points ! which are used in the conjugate gradient algorithm. ! DO ng=1,Ngrids IF (Master) THEN WRITE (stdout,20) 'TL', ng, ntstart(ng), ntend(ng) END IF END DO !$OMP PARALLEL #ifdef SOLVE3D CALL tl_main3d (RunInterval) #else CALL tl_main2d (RunInterval) #endif !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN DO ng=1,Ngrids wrtNLmod(ng)=.FALSE. wrtTLmod(ng)=.FALSE. END DO #ifdef OBS_IMPACT ! ! Compute observation impact to the data assimilation system. ! DO ng=1,Ngrids # ifdef RPCG CALL rep_matrix (ng, iTLM, outer, Ninner-1) # else CALL rep_matrix (ng, iTLM, outer, Ninner) # endif END DO #else ! ! Set basic state trajectory for adjoint inner-loops. ! DO ng=1,Ngrids WRITE (FWD(ng)%name,10) TRIM(FWD(ng)%base), outer-1 END DO ! ! Clear tangent linear forcing arrays before entering inner-loop. ! DO ng=1,Ngrids !$OMP PARALLEL DO tile=first_tile(ng),last_tile(ng),+1 CALL initialize_forces (ng, tile, iTLM) # ifdef ADJUST_BOUNDARY CALL initialize_boundary (ng, tile, iTLM) # endif END DO !$OMP END PARALLEL END DO ! AD_INNER_LOOP : DO my_inner=Ninner,1,-1 inner=my_inner IF (Master) THEN WRITE (stdout,60) 'Adjoint of', uppercase('w4dpsas'), & & outer, inner END IF ! ! Call adjoint conjugate gradient algorithm. ! Lcgini=.FALSE. DO ng=1,Ngrids CALL ad_congrad (ng, iTLM, outer, inner, Ninner, Lcgini) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! ! Initialize the adjoint model from rest. ! DO ng=1,Ngrids LsenPSAS(ng)=.FALSE. !$OMP PARALLEL CALL ad_initial (ng) !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN wrtMisfit(ng)=.FALSE. END DO ! ! Set adjoint history NetCDF parameters. Define adjoint history ! file only once to avoid opening too many files. ! WRTforce=.TRUE. DO ng=1,Ngrids IF (Nrun.gt.1) LdefADJ(ng)=.FALSE. Fcount=ADM(ng)%Fcount ADM(ng)%Nrec(Fcount)=0 ADM(ng)%Rindex=0 END DO ! ! Time-step adjoint model backwards forced with current PSI vector. ! DO ng=1,Ngrids IF (Master) THEN WRITE (stdout,20) 'AD', ng, ntstart(ng), ntend(ng) END IF END DO !$OMP PARALLEL # ifdef SOLVE3D CALL ad_main3d (RunInterval) # else CALL ad_main2d (RunInterval) # endif !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN ! ! Write out last weak-constraint forcing (WRTforce is still .TRUE.) ! record into the adjoint history file. Note that the weak-constraint ! forcing is delayed by nADJ time-steps. ! DO ng=1,Ngrids CALL ad_wrt_his (ng) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! ! Write out adjoint initial condition record into the adjoint ! history file. ! WRTforce=.FALSE. DO ng=1,Ngrids CALL ad_wrt_his (ng) END DO ! ! Convolve adjoint trajectory with error covariances. ! Lposterior=.FALSE. CALL error_covariance (iTLM, driver, outer, inner, & & Lbck, Lini, Lold, Lnew, & & Rec1, Rec2, Lposterior) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN ! ! Convert the current adjoint solution in ADM(ng)%name to impulse ! forcing. Write out impulse forcing into TLF(ng)%name NetCDF file. ! To facilitate the forcing to the TLM and RPM, the forcing is ! processed and written in increasing time coordinates (recall that ! the adjoint solution in ADM(ng)%name is backwards in time). ! !! !! AMM: Do not know what to do in the weak constraint case yet. !! !! IF (Master) THEN !! WRITE (stdout,40) outer, inner !! END IF !! DO ng=1,Ngrids !! TLF(ng)%Rindex=0 # ifdef DISTRIBUTE !! tile=MyRank # else !! tile=-1 # endif !! CALL wrt_impulse (ng, tile, iADM, ADM(ng)%name) !! IF (FoundError(exit_flag, NoError, __LINE__, & !! & __FILE__)) RETURN !! END DO ! !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! Integrate tangent linear model. !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! ! Initialize tangent linear model from initial impulse which is now ! stored in file ITL(ng)%name. ! DO ng=1,Ngrids wrtNLmod(ng)=.FALSE. wrtTLmod(ng)=.TRUE. END DO ! ! If weak constraint, the impulses are time-interpolated at each ! time-steps. ! DO ng=1,Ngrids IF (FrcRec(ng).gt.3) THEN FrequentImpulse(ng)=.TRUE. END IF END DO ! ! Initialize tangent linear model from ITL(ng)%name, record 1. ! DO ng=1,Ngrids ITL(ng)%Rindex=Rec1 !$OMP PARALLEL CALL tl_initial (ng) !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! ! Set tangent linear history NetCDF parameters. Define tangent linear ! history file at the beggining of each inner loop to avoid opening ! too many NetCDF files. ! DO ng=1,Ngrids IF (inner.gt.Ninner) LdefTLM(ng)=.FALSE. Fcount=TLM(ng)%Fcount TLM(ng)%Nrec(Fcount)=0 TLM(ng)%Rindex=0 END DO ! ! Run tangent linear model forward and force with convolved adjoint ! trajectory impulses. ! DO ng=1,Ngrids IF (Master) THEN WRITE (stdout,20) 'TL', ng, ntstart(ng), ntend(ng) END IF END DO !$OMP PARALLEL # ifdef SOLVE3D CALL tl_main3d (RunInterval) # else CALL tl_main2d (RunInterval) # endif !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN DO ng=1,Ngrids wrtNLmod(ng)=.FALSE. wrtTLmod(ng)=.FALSE. END DO END DO AD_INNER_LOOP ! ! Call adjoint conjugate gradient algorithm. ! inner=0 Lcgini=.TRUE. DO ng=1,Ngrids CALL ad_congrad (ng, iTLM, outer, inner, Ninner, Lcgini) END DO #endif /* !OBS_IMPACT */ #ifdef OBS_IMPACT ! ! Write out total observation impact. ! SourceFile=__FILE__ // ", ROMS_run" DO ng=1,Ngrids CALL netcdf_put_fvar (ng, iNLM, DAV(ng)%name, & & 'ObsImpact_total', ad_ObsVal, & # ifdef IMPACT_INNER & (/1,1/), (/Mobs,Ninner/), & # else & (/1/), (/Mobs/), & # endif & ncid = DAV(ng)%ncid) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN CALL netcdf_sync (ng, iNLM, DAV(ng)%name, DAV(ng)%ncid) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO #else ! ! Write out observation sensitivity. ! SourceFile=__FILE__ // ", ROMS_run" DO ng=1,Ngrids CALL netcdf_put_fvar (ng, iTLM, DAV(ng)%name, & & 'ObsSens_total', ad_ObsVal, & & (/1/), (/Mobs/), & & ncid = DAV(ng)%ncid) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN CALL netcdf_sync (ng, iNLM, DAV(ng)%name, DAV(ng)%ncid) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO #endif ! ! Close tangent linear NetCDF file. ! SourceFile=__FILE__ // ", ROMS_run" DO ng=1,Ngrids CALL netcdf_close (ng, iTLM, TLM(ng)%ncid) TLM(ng)%ncid=-1 END DO #if defined OBS_IMPACT && defined OBS_IMPACT_SPLIT ! !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! Integrate tangent linear model with initial condition increments ! only to compute the observation impact associated with the initial ! conditions. !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! DO ng=1,Ngrids wrtNLmod(ng)=.FALSE. wrtTLmod(ng)=.TRUE. LwrtTLM(ng)=.FALSE. END DO ! ! Clear tangent linear forcing arrays before entering inner-loop. ! This is very important since these arrays are non-zero after ! running the representer model and must be zero when running the ! tangent linear model. ! DO ng=1,Ngrids !$OMP PARALLEL DO tile=first_tile(ng),last_tile(ng),+1 CALL initialize_forces (ng, tile, iTLM) # ifdef ADJUST_BOUNDARY CALL initialize_boundary (ng, tile, iTLM) # endif END DO !$OMP END PARALLEL END DO ! ! Set basic state trajectory. ! DO ng=1,Ngrids WRITE (FWD(ng)%name,10) TRIM(FWD(ng)%base), outer-1 END DO ! ! If weak constraint, the impulses are time-interpolated at each ! time-steps. ! DO ng=1,Ngrids IF (FrcRec(ng).gt.3) THEN FrequentImpulse(ng)=.TRUE. END IF END DO ! ! Initialize tangent linear model from ITL(ng)%name, record 1. ! DO ng=1,Ngrids ITL(ng)%Rindex=Rec1 !$OMP PARALLEL CALL tl_initial (ng) !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! ! Clear tangent linear forcing arrays and boundary arrays ! before the obs impact initial condition calculation. ! DO ng=1,Ngrids !$OMP PARALLEL DO tile=first_tile(ng),last_tile(ng),+1 CALL initialize_forces (ng, tile, iTLM) # ifdef ADJUST_BOUNDARY CALL initialize_boundary (ng, tile, iTLM) # endif END DO !$OMP END PARALLEL END DO ! ! Run tangent linear model forward and force with convolved adjoint ! trajectory impulses. Compute (HMBM'H')_n * PSI at observation points ! which are used in the conjugate gradient algorithm. ! DO ng=1,Ngrids IF (Master) THEN WRITE (stdout,20) 'TL', ng, ntstart(ng), ntend(ng) END IF END DO !$OMP PARALLEL # ifdef SOLVE3D CALL tl_main3d (RunInterval) # else CALL tl_main2d (RunInterval) # endif !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN DO ng=1,Ngrids wrtNLmod(ng)=.FALSE. wrtTLmod(ng)=.FALSE. END DO ! ! Compute observation impact to the data assimilation system. ! DO ng=1,Ngrids # ifdef RPCG CALL rep_matrix (ng, iTLM, outer, Ninner-1) # else CALL rep_matrix (ng, iTLM, outer, Ninner) # endif END DO ! ! Write out observation sentivity. ! SourceFile=__FILE__ // ", ROMS_run" DO ng=1,Ngrids CALL netcdf_put_fvar (ng, iTLM, DAV(ng)%name, & & 'ObsImpact_IC', ad_ObsVal, & # ifdef IMPACT_INNER & (/1,1/), (/Mobs,Ninner/), & # else & (/1/), (/Mobs/), & # endif & ncid = DAV(ng)%ncid) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN CALL netcdf_sync (ng, iNLM, DAV(ng)%name, DAV(ng)%ncid) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO # if defined ADJUST_WSTRESS || defined ADJUST_STFLUX ! !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! Integrate tangent linear model with surface forcing increments ! only to compute the observation impact associated with the surface ! forcing. !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! DO ng=1,Ngrids wrtNLmod(ng)=.FALSE. wrtTLmod(ng)=.TRUE. LwrtTLM(ng)=.FALSE. END DO ! ! Clear tangent linear forcing arrays before entering inner-loop. ! This is very important since these arrays are non-zero after ! running the representer model and must be zero when running the ! tangent linear model. ! DO ng=1,Ngrids !$OMP PARALLEL DO tile=first_tile(ng),last_tile(ng),+1 CALL initialize_forces (ng, tile, iTLM) # ifdef ADJUST_BOUNDARY CALL initialize_boundary (ng, tile, iTLM) # endif END DO !$OMP END PARALLEL END DO ! ! Set basic state trajectory. ! DO ng=1,Ngrids WRITE (FWD(ng)%name,10) TRIM(FWD(ng)%base), outer-1 END DO ! ! If weak constraint, the impulses are time-interpolated at each ! time-steps. ! DO ng=1,Ngrids IF (FrcRec(ng).gt.3) THEN FrequentImpulse(ng)=.TRUE. END IF END DO ! ! Initialize tangent linear model from ITL(ng)%name, record 1. ! DO ng=1,Ngrids ITL(ng)%Rindex=Rec1 !$OMP PARALLEL CALL tl_initial (ng) !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! ! Clear tangent initial condition arrays and boundary arrays ! before the obs impact initial condition calculation. ! DO ng=1,Ngrids !$OMP PARALLEL DO tile=first_tile(ng),last_tile(ng),+1 CALL initialize_ocean (ng, tile, iTLM) # ifdef ADJUST_BOUNDARY CALL initialize_boundary (ng, tile, iTLM) # endif END DO !$OMP END PARALLEL END DO ! ! Run tangent linear model forward and force with convolved adjoint ! trajectory impulses. Compute (HMBM'H')_n * PSI at observation points ! which are used in the conjugate gradient algorithm. ! DO ng=1,Ngrids IF (Master) THEN WRITE (stdout,20) 'TL', ng, ntstart(ng), ntend(ng) END IF END DO !$OMP PARALLEL # ifdef SOLVE3D CALL tl_main3d (RunInterval) # else CALL tl_main2d (RunInterval) # endif !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN DO ng=1,Ngrids wrtNLmod(ng)=.FALSE. wrtTLmod(ng)=.FALSE. END DO ! ! Compute observation impact to the data assimilation system. ! DO ng=1,Ngrids # ifdef RPCG CALL rep_matrix (ng, iTLM, outer, Ninner-1) # else CALL rep_matrix (ng, iTLM, outer, Ninner) # endif END DO ! ! Write out observation sentivity. ! SourceFile=__FILE__ // ", ROMS_run" DO ng=1,Ngrids CALL netcdf_put_fvar (ng, iTLM, DAV(ng)%name, & & 'ObsImpact_FC', ad_ObsVal, & # ifdef IMPACT_INNER & (/1,1/), (/Mobs,Ninner/), & # else & (/1/), (/Mobs/), & # endif & ncid = DAV(ng)%ncid) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN CALL netcdf_sync (ng, iNLM, DAV(ng)%name, DAV(ng)%ncid) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO # endif # if defined ADJUST_BOUNDARY ! !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! Integrate tangent linear model with boundary condition increments ! only to compute the obs impact associated with the boundary ! conditions. !::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ! DO ng=1,Ngrids wrtNLmod(ng)=.FALSE. wrtTLmod(ng)=.TRUE. LwrtTLM(ng)=.FALSE. END DO ! ! Clear tangent linear forcing arrays before entering inner-loop. ! This is very important since these arrays are non-zero after ! running the representer model and must be zero when running the ! tangent linear model. ! DO ng=1,Ngrids !$OMP PARALLEL DO tile=first_tile(ng),last_tile(ng),+1 CALL initialize_forces (ng, tile, iTLM) # ifdef ADJUST_BOUNDARY CALL initialize_boundary (ng, tile, iTLM) # endif END DO !$OMP END PARALLEL END DO ! ! Set basic state trajectory. ! DO ng=1,Ngrids WRITE (FWD(ng)%name,10) TRIM(FWD(ng)%base), outer-1 END DO ! ! If weak constraint, the impulses are time-interpolated at each ! time-steps. ! DO ng=1,Ngrids IF (FrcRec(ng).gt.3) THEN FrequentImpulse(ng)=.TRUE. END IF END DO ! ! Initialize tangent linear model from ITL(ng)%name, record Rec1. ! DO ng=1,Ngrids ITL(ng)%Rindex=Rec1 !$OMP PARALLEL CALL tl_initial (ng) !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO ! ! Clear tangent linear initial condition and forcing arrays ! before the obs impact initial condition calculation. ! DO ng=1,Ngrids !$OMP PARALLEL DO tile=first_tile(ng),last_tile(ng),+1 CALL initialize_ocean (ng, tile, iTLM) CALL initialize_forces (ng, tile, iTLM) END DO !$OMP END PARALLEL END DO ! ! Run tangent linear model forward and force with convolved adjoint ! trajectory impulses. Compute (HMBM'H')_n * PSI at observation points ! which are used in the conjugate gradient algorithm. ! DO ng=1,Ngrids IF (Master) THEN WRITE (stdout,20) 'TL', ng, ntstart(ng), ntend(ng) END IF END DO !$OMP PARALLEL # ifdef SOLVE3D CALL tl_main3d (RunInterval) # else CALL tl_main2d (RunInterval) # endif !$OMP END PARALLEL IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN DO ng=1,Ngrids wrtNLmod(ng)=.FALSE. wrtTLmod(ng)=.FALSE. END DO ! ! Compute observation impact to the data assimilation system. ! DO ng=1,Ngrids # ifdef RPCG CALL rep_matrix (ng, iTLM, outer, Ninner-1) # else CALL rep_matrix (ng, iTLM, outer, Ninner) # endif END DO ! ! Write out observation sentivity. ! SourceFile=__FILE__ // ", ROMS_run" DO ng=1,Ngrids CALL netcdf_put_fvar (ng, iTLM, DAV(ng)%name, & & 'ObsImpact_BC', ad_ObsVal, & # ifdef IMPACT_INNER & (/1,1/), (/Mobs,Ninner/), & # else & (/1/), (/Mobs/), & # endif & ncid = DAV(ng)%ncid) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN CALL netcdf_sync (ng, iNLM, DAV(ng)%name, DAV(ng)%ncid) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END DO # endif #endif /* OBS_IMPACT_SPLIT */ ! ! Close current forward NetCDF file. ! SourceFile=__FILE__ // ", ROMS_run" DO ng=1,Ngrids CALL netcdf_close (ng, iNLM, FWD(ng)%ncid) FWD(ng)%ncid=-1 END DO END DO AD_OUTER_LOOP ! 10 FORMAT (a,'_',i3.3,'.nc') 20 FORMAT (/,1x,a,1x,'ROMS/TOMS: started time-stepping:', & & ' (Grid: ',i2.2,' TimeSteps: ',i8.8,' - ',i8.8,')',/) 30 FORMAT (' (',i3.3,',',i3.3,'): ',a,' data penalty, Jdata = ', & & 1p,e17.10,0p,t68,a) 40 FORMAT (/,' Converting Convolved Adjoint Trajectory to', & & ' Impulses: Outer = ',i3.3,' Inner = ',i3.3,/) 50 FORMAT (/,'ROMS/TOMS: Started adjoint Sensitivity calculation', & & ' ...',/) 60 FORMAT (/,'ROMS/TOMS: ',a,1x,a,', Outer = ',i3.3, & & ' Inner = ',i3.3,/) 70 FORMAT (/,1x,a,1x,'ROMS/TOMS: adjoint forcing time range: ', & & f12.4,' - ',f12.4 ,/) RETURN END SUBROUTINE ROMS_run SUBROUTINE ROMS_finalize ! !======================================================================= ! ! ! This routine terminates ROMS/TOMS nonlinear, tangent linear, and ! ! adjoint models execution. ! ! ! !======================================================================= ! USE mod_param USE mod_parallel USE mod_iounits USE mod_ncparam USE mod_scalars ! ! Local variable declarations. ! integer :: Fcount, ng, thread ! !----------------------------------------------------------------------- ! If blowing-up, save latest model state into RESTART NetCDF file. !----------------------------------------------------------------------- ! ! If cycling restart records, write solution into record 3. ! IF (exit_flag.eq.1) THEN DO ng=1,Ngrids IF (LwrtRST(ng)) THEN IF (Master) WRITE (stdout,10) 10 FORMAT (/,' Blowing-up: Saving latest model state into ', & & ' RESTART file',/) Fcount=RST(ng)%Fcount IF (LcycleRST(ng).and.(RST(ng)%Nrec(Fcount).ge.2)) THEN RST(ng)%Rindex=2 LcycleRST(ng)=.FALSE. END IF blowup=exit_flag exit_flag=NoError CALL wrt_rst (ng) END IF END DO END IF ! !----------------------------------------------------------------------- ! Stop model and time profiling clocks, report memory requirements, and ! close output NetCDF files. !----------------------------------------------------------------------- ! ! Stop time clocks. ! IF (Master) THEN WRITE (stdout,20) 20 FORMAT (/,'Elapsed CPU time (seconds):',/) END IF ! DO ng=1,Ngrids !$OMP PARALLEL DO thread=THREAD_RANGE CALL wclock_off (ng, iNLM, 0, __LINE__, __FILE__) END DO !$OMP END PARALLEL END DO ! ! Report dynamic memory and automatic memory requirements. ! !$OMP PARALLEL CALL memory !$OMP END PARALLEL ! ! Close IO files. ! CALL close_out RETURN END SUBROUTINE ROMS_finalize END MODULE ocean_control_mod