#include "cppdefs.h" #ifdef DIAGNOSTICS SUBROUTINE def_diags (ng, ldef) ! !svn $Id: def_diags.F 927 2018-10-16 03:51:56Z arango $ !================================================== Hernan G. Arango === ! Copyright (c) 2002-2019 The ROMS/TOMS Group ! ! Licensed under a MIT/X style license ! ! See License_ROMS.txt ! !======================================================================= ! ! ! This routine creates diagnostics NetCDF file, it defines its ! ! dimensions, attributes, and variables. ! ! ! !======================================================================= ! USE mod_param USE mod_parallel # ifdef BIOLOGY USE mod_biology # endif # ifdef FOUR_DVAR USE mod_fourdvar # endif USE mod_iounits USE mod_ncparam USE mod_netcdf USE mod_scalars # ifdef SEDIMENT USE mod_sediment # endif ! USE def_var_mod, ONLY : def_var USE strings_mod, ONLY : FoundError ! implicit none ! ! Imported variable declarations. ! integer, intent(in) :: ng logical, intent(in) :: ldef ! ! Local variable declarations. ! logical :: got_var(NV) integer, parameter :: Natt = 25 integer :: i, ifield, itrc, ivar, j, nvd3, nvd4 integer :: recdim, status # if defined WRITE_WATER && defined MASKING integer :: xy_pdim, xyz_pdim # endif integer :: DimIDs(32), t2dgrd(3), u2dgrd(3), v2dgrd(3) integer :: Vsize(4) integer :: def_dim # ifdef SOLVE3D # ifdef SEDIMENT integer :: b3dgrd(4) # endif integer :: t3dgrd(4), u3dgrd(4), v3dgrd(4), w3dgrd(4) # endif real(r8) :: Aval(6) character (len=120) :: Vinfo(Natt) character (len=256) :: ncname ! SourceFile=__FILE__ ! !----------------------------------------------------------------------- ! Set and report file name. !----------------------------------------------------------------------- ! IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN ncname=DIA(ng)%name ! IF (Master) THEN IF (ldef) THEN WRITE (stdout,10) ng, TRIM(ncname) ELSE WRITE (stdout,20) ng, TRIM(ncname) END IF END IF ! !======================================================================= ! Create a new diagnostics NetCDF file. !======================================================================= ! DEFINE : IF (ldef) THEN CALL netcdf_create (ng, iNLM, TRIM(ncname), DIA(ng)%ncid) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) THEN IF (Master) WRITE (stdout,30) TRIM(ncname) RETURN END IF ! !----------------------------------------------------------------------- ! Define file dimensions. !----------------------------------------------------------------------- ! DimIDs=0 ! status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'xi_rho', & & IOBOUNDS(ng)%xi_rho, DimIDs( 1)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'xi_u', & & IOBOUNDS(ng)%xi_u, DimIDs( 2)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'xi_v', & & IOBOUNDS(ng)%xi_v, DimIDs( 3)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'xi_psi', & & IOBOUNDS(ng)%xi_psi, DimIDs( 4)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'eta_rho', & & IOBOUNDS(ng)%eta_rho, DimIDs( 5)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'eta_u', & & IOBOUNDS(ng)%eta_u, DimIDs( 6)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'eta_v', & & IOBOUNDS(ng)%eta_v, DimIDs( 7)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'eta_psi', & & IOBOUNDS(ng)%eta_psi, DimIDs( 8)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN # if defined WRITE_WATER && defined MASKING status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'xy_psi', & & IOBOUNDS(ng)%xy_psi, xy_pdim) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'xy_rho', & & IOBOUNDS(ng)%xy_rho, DimIDs(17)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'xy_u', & & IOBOUNDS(ng)%xy_u, DimIDs(18)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'xy_v', & & IOBOUNDS(ng)%xy_v, DimIDs(19)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN # endif # ifdef SOLVE3D # if defined WRITE_WATER && defined MASKING status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'xyz_psi', & & IOBOUNDS(ng)%xy_psi*N(ng), xyz_pdim) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'xyz_rho', & & IOBOUNDS(ng)%xy_rho*N(ng), DimIDs(20)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'xyz_u', & & IOBOUNDS(ng)%xy_u*N(ng), DimIDs(21)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'xyz_v', & & IOBOUNDS(ng)%xy_v*N(ng), DimIDs(22)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'xyz_w', & & IOBOUNDS(ng)%xy_rho*(N(ng)+1), DimIDs(23)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN # endif status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 's_rho', & & N(ng), DimIDs( 9)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 's_w', & & N(ng)+1, DimIDs(10)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'tracer', & & NT(ng), DimIDs(11)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN # ifdef SEDIMENT status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'NST', & & NST, DimIDs(32)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'Nbed', & & Nbed, DimIDs(16)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN # if defined WRITE_WATER && defined MASKING status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'xybed', & & IOBOUNDS(ng)%xy_rho*Nbed, DimIDs(24)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN # endif # endif # if defined VARIABLE_CDOM && defined SPECTRAL_LIGHT status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'Ndom', & & Ndom, DimIDs(27)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN # endif # ifdef ECOSIM status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'Nphy', & & Nphy, DimIDs(25)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'Nbac', & & Nbac, DimIDs(26)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'Ndom', & & Ndom, DimIDs(27)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'Nfec', & & Nfec, DimIDs(28)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN # endif # endif status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'boundary', & & 4, DimIDs(14)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN # ifdef FOUR_DVAR status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, 'Nstate', & & NstateVar(ng), DimIDs(29)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN # endif status=def_dim(ng, iNLM, DIA(ng)%ncid, ncname, & & TRIM(ADJUSTL(Vname(5,idtime))), & & nf90_unlimited, DimIDs(12)) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN recdim=DimIDs(12) ! ! Set number of dimensions for output variables. ! #if defined WRITE_WATER && defined MASKING nvd3=2 nvd4=2 #else nvd3=3 nvd4=4 #endif ! ! Define dimension vectors for staggered tracer type variables. ! # if defined WRITE_WATER && defined MASKING t2dgrd(1)=DimIDs(17) t2dgrd(2)=DimIDs(12) # ifdef SOLVE3D t3dgrd(1)=DimIDs(20) t3dgrd(2)=DimIDs(12) # endif # else t2dgrd(1)=DimIDs( 1) t2dgrd(2)=DimIDs( 5) t2dgrd(3)=DimIDs(12) # ifdef SOLVE3D t3dgrd(1)=DimIDs( 1) t3dgrd(2)=DimIDs( 5) t3dgrd(3)=DimIDs( 9) t3dgrd(4)=DimIDs(12) # endif # endif ! ! Define dimension vectors for staggered u-momentum type variables. ! # if defined WRITE_WATER && defined MASKING u2dgrd(1)=DimIDs(18) u2dgrd(2)=DimIDs(12) # ifdef SOLVE3D u3dgrd(1)=DimIDs(21) u3dgrd(2)=DimIDs(12) # endif # else u2dgrd(1)=DimIDs( 2) u2dgrd(2)=DimIDs( 6) u2dgrd(3)=DimIDs(12) # ifdef SOLVE3D u3dgrd(1)=DimIDs( 2) u3dgrd(2)=DimIDs( 6) u3dgrd(3)=DimIDs( 9) u3dgrd(4)=DimIDs(12) # endif # endif ! ! Define dimension vectors for staggered v-momentum type variables. ! # if defined WRITE_WATER && defined MASKING v2dgrd(1)=DimIDs(19) v2dgrd(2)=DimIDs(12) # ifdef SOLVE3D v3dgrd(1)=DimIDs(22) v3dgrd(2)=DimIDs(12) # endif # else v2dgrd(1)=DimIDs( 3) v2dgrd(2)=DimIDs( 7) v2dgrd(3)=DimIDs(12) # ifdef SOLVE3D v3dgrd(1)=DimIDs( 3) v3dgrd(2)=DimIDs( 7) v3dgrd(3)=DimIDs( 9) v3dgrd(4)=DimIDs(12) # endif # endif # ifdef SOLVE3D ! ! Define dimension vector for staggered w-momentum type variables. ! # if defined WRITE_WATER && defined MASKING w3dgrd(1)=DimIDs(23) w3dgrd(2)=DimIDs(12) # else w3dgrd(1)=DimIDs( 1) w3dgrd(2)=DimIDs( 5) w3dgrd(3)=DimIDs(10) w3dgrd(4)=DimIDs(12) # endif # ifdef SEDIMENT ! ! Define dimension vector for sediment bed layer type variables. ! # if defined WRITE_WATER && defined MASKING b3dgrd(1)=DimIDs(24) b3dgrd(2)=DimIDs(12) # else b3dgrd(1)=DimIDs( 1) b3dgrd(2)=DimIDs( 5) b3dgrd(3)=DimIDs(16) b3dgrd(4)=DimIDs(12) # endif # endif # endif ! ! Initialize unlimited time record dimension. ! DIA(ng)%Rindex=0 ! ! Initialize local information variable arrays. ! DO i=1,Natt DO j=1,LEN(Vinfo(1)) Vinfo(i)(j:j)=' ' END DO END DO DO i=1,6 Aval(i)=0.0_r8 END DO ! !----------------------------------------------------------------------- ! Define time-recordless information variables. !----------------------------------------------------------------------- ! CALL def_info (ng, iNLM, DIA(ng)%ncid, ncname, DimIDs) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN ! !----------------------------------------------------------------------- ! Define variables and their attributes. !----------------------------------------------------------------------- ! ! Define model time. ! Vinfo( 1)=Vname(1,idtime) WRITE (Vinfo( 2),'(a,a)') 'averaged ', TRIM(Vname(2,idtime)) WRITE (Vinfo( 3),'(a,a)') 'seconds since ', TRIM(Rclock%string) Vinfo( 4)=TRIM(Rclock%calendar) Vinfo(14)=Vname(4,idtime) status=def_var(ng, iNLM, DIA(ng)%ncid, DIA(ng)%Vid(idtime), & & NF_TOUT, 1, (/recdim/), Aval, Vinfo, ncname, & & SetParAccess = .TRUE.) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN # ifdef DIAGNOSTICS_UV ! ! Define 2D momentum diagnostic fields. ! DO ivar=1,NDM2d ifield=idDu2d(ivar) IF (Dout(ifield,ng)) THEN Vinfo( 1)=Vname(1,ifield) Vinfo( 2)=Vname(2,ifield) Vinfo( 3)=Vname(3,ifield) Vinfo(14)=Vname(4,ifield) Vinfo(16)=Vname(1,idtime) # if defined WRITE_WATER && defined MASKING Vinfo(20)='mask_u' # endif Vinfo(22)='coordinates' Aval(5)=REAL(u2dvar,r8) status=def_var(ng, iNLM, DIA(ng)%ncid, DIA(ng)%Vid(ifield), & & NF_FOUT, nvd3, u2dgrd, Aval, Vinfo, ncname) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END IF ifield=idDv2d(ivar) IF (Dout(ifield,ng)) THEN Vinfo( 1)=Vname(1,ifield) Vinfo( 2)=Vname(2,ifield) Vinfo( 3)=Vname(3,ifield) Vinfo(14)=Vname(4,ifield) Vinfo(16)=Vname(1,idtime) # if defined WRITE_WATER && defined MASKING Vinfo(20)='mask_v' # endif Vinfo(22)='coordinates' Aval(5)=REAL(v2dvar,r8) status=def_var(ng, iNLM, DIA(ng)%ncid, DIA(ng)%Vid(ifield), & & NF_FOUT, nvd3, v2dgrd, Aval, Vinfo, ncname) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END IF END DO # ifdef SOLVE3D ! ! Define 3D momentum diagnostic fields. ! DO ivar=1,NDM3d ifield=idDu3d(ivar) IF (Dout(ifield,ng)) THEN Vinfo( 1)=Vname(1,ifield) Vinfo( 2)=Vname(2,ifield) Vinfo( 3)=Vname(3,ifield) Vinfo(14)=Vname(4,ifield) Vinfo(16)=Vname(1,idtime) # if defined WRITE_WATER && defined MASKING Vinfo(20)='mask_u' # endif Vinfo(22)='coordinates' Aval(5)=REAL(u3dvar,r8) status=def_var(ng, iNLM, DIA(ng)%ncid, DIA(ng)%Vid(ifield), & & NF_FOUT, nvd4, u3dgrd, Aval, Vinfo, ncname) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END IF ifield=idDv3d(ivar) IF (Dout(ifield,ng)) THEN Vinfo( 1)=Vname(1,ifield) Vinfo( 2)=Vname(2,ifield) Vinfo( 3)=Vname(3,ifield) Vinfo(14)=Vname(4,ifield) Vinfo(16)=Vname(1,idtime) # if defined WRITE_WATER && defined MASKING Vinfo(20)='mask_v' # endif Vinfo(22)='coordinates' Aval(5)=REAL(v3dvar,r8) status=def_var(ng, iNLM, DIA(ng)%ncid, DIA(ng)%Vid(ifield), & & NF_FOUT, nvd4, v3dgrd, Aval, Vinfo, ncname) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END IF END DO # endif # endif # ifdef DIAGNOSTICS_TS ! ! Define tracer diagnostic fields. ! DO itrc=1,NT(ng) DO ivar=1,NDT ifield=idDtrc(itrc,ivar) IF (Dout(ifield,ng)) THEN Vinfo( 1)=Vname(1,ifield) Vinfo( 2)=Vname(2,ifield) Vinfo( 3)=Vname(3,ifield) Vinfo(14)=Vname(4,ifield) Vinfo(16)=Vname(1,idtime) # if defined WRITE_WATER && defined MASKING Vinfo(20)='mask_rho' # endif Vinfo(22)='coordinates' Aval(5)=REAL(r3dvar,r8) status=def_var(ng, iNLM, DIA(ng)%ncid, & & DIA(ng)%Vid(ifield), NF_FOUT, & & nvd4, t3dgrd, Aval, Vinfo, ncname) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END IF END DO END DO # endif # ifdef DIAGNOSTICS_BIO # if defined BIO_FENNEL || defined HYPOXIA_SRM ! ! Define 2D biological diagnostic fields. ! DO ivar=1,NDbio2d ifield=iDbio2(ivar) IF (Dout(ifield,ng)) THEN Vinfo( 1)=Vname(1,ifield) WRITE (Vinfo( 2),'(a,1x,a)') 'averaged', & & TRIM(Vname(2,ifield)) Vinfo( 3)=Vname(3,ifield) Vinfo(14)=Vname(4,ifield) Vinfo(16)=Vname(1,idtime) # if defined WRITE_WATER && defined MASKING Vinfo(20)='mask_rho' # endif Vinfo(22)='coordinates' Aval(5)=REAL(r2dvar,r8) status=def_var(ng, iNLM, DIA(ng)%ncid, DIA(ng)%Vid(ifield), & & NF_FOUT, nvd3, t2dgrd, Aval, Vinfo, ncname) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END IF END DO # endif # if defined BIO_FENNEL ! ! Define 3D biological diagnostic fields. ! DO ivar=1,NDbio3d ifield=iDbio3(ivar) IF (Dout(ifield,ng)) THEN Vinfo( 1)=Vname(1,ifield) WRITE (Vinfo( 2),'(a,1x,a)') 'averaged', & & TRIM(Vname(2,ifield)) Vinfo( 3)=Vname(3,ifield) Vinfo(14)=Vname(4,ifield) Vinfo(16)=Vname(1,idtime) # if defined WRITE_WATER && defined MASKING Vinfo(20)='mask_rho' # endif Vinfo(22)='coordinates' Aval(5)=REAL(r3dvar,r8) status=def_var(ng, iNLM, DIA(ng)%ncid, DIA(ng)%Vid(ifield), & & NF_FOUT, nvd4, t3dgrd, Aval, Vinfo, ncname) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END IF END DO # endif # endif ! !----------------------------------------------------------------------- ! Leave definition mode. !----------------------------------------------------------------------- ! CALL netcdf_enddef (ng, iNLM, ncname, DIA(ng)%ncid) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN ! !----------------------------------------------------------------------- ! Write out time-recordless, information variables. !----------------------------------------------------------------------- ! CALL wrt_info (ng, iNLM, DIA(ng)%ncid, ncname) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN END IF DEFINE ! !======================================================================= ! Open an existing diagnostics file, check its contents, and prepare ! for appending data. !======================================================================= ! QUERY : IF (.not.ldef) THEN ncname=DIA(ng)%name ! ! Open diagnostics file for read/write. ! CALL netcdf_open (ng, iNLM, ncname, 1, DIA(ng)%ncid) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) THEN WRITE (stdout,50) TRIM(ncname) RETURN END IF ! ! Inquire about the dimensions and check for consistency. ! CALL netcdf_check_dim (ng, iNLM, ncname, & & ncid = DIA(ng)%ncid) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN ! ! Inquire about the variables. ! CALL netcdf_inq_var (ng, iNLM, ncname, & & ncid = DIA(ng)%ncid) IF (FoundError(exit_flag, NoError, __LINE__, & & __FILE__)) RETURN ! ! Initialize logical switches. ! DO i=1,NV got_var(i)=.FALSE. END DO ! ! Scan variable list from input NetCDF and activate switches for ! diagnostics variables. Get variable IDs. ! DO i=1,n_var IF (TRIM(var_name(i)).eq.TRIM(Vname(1,idtime))) THEN got_var(idtime)=.TRUE. DIA(ng)%Vid(idtime)=var_id(i) END IF # ifdef DIAGNOSTICS_UV DO ivar=1,NDM2d IF (TRIM(var_name(i)).eq. & & TRIM(Vname(1,idDu2d(ivar)))) THEN got_var(idDu2d(ivar))=.TRUE. DIA(ng)%Vid(idDu2d(ivar))=var_id(i) ELSE IF (TRIM(var_name(i)).eq. & & TRIM(Vname(1,idDv2d(ivar)))) THEN got_var(idDv2d(ivar))=.TRUE. DIA(ng)%Vid(idDv2d(ivar))=var_id(i) END IF END DO # ifdef SOLVE3D DO ivar=1,NDM3d IF (TRIM(var_name(i)).eq. & & TRIM(Vname(1,idDu3d(ivar)))) THEN got_var(idDu3d(ivar))=.TRUE. DIA(ng)%Vid(idDu3d(ivar))=var_id(i) ELSE IF (TRIM(var_name(i)).eq. & & TRIM(Vname(1,idDv3d(ivar)))) THEN got_var(idDv3d(ivar))=.TRUE. DIA(ng)%Vid(idDv3d(ivar))=var_id(i) END IF END DO # endif # endif # ifdef DIAGNOSTICS_TS DO itrc=1,NT(ng) DO ivar=1,NDT ifield=idDtrc(itrc,ivar) IF (TRIM(var_name(i)).eq.TRIM(Vname(1,ifield))) THEN got_var(ifield)=.TRUE. DIA(ng)%Vid(ifield)=var_id(i) END IF END DO END DO # endif # ifdef DIAGNOSTICS_BIO # if defined BIO_FENNEL || defined HYPOXIA_SRM DO ivar=1,NDbio2d ifield=iDbio2(ivar) IF (TRIM(var_name(i)).eq.TRIM(Vname(1,ifield))) THEN got_var(ifield)=.TRUE. DIA(ng)%Vid(ifield)=var_id(i) END IF END DO # endif # if defined BIO_FENNEL DO ivar=1,NDbio3d ifield=iDbio3(ivar) IF (TRIM(var_name(i)).eq.TRIM(Vname(1,ifield))) THEN got_var(ifield)=.TRUE. DIA(ng)%Vid(ifield)=var_id(i) END IF END DO # endif # endif END DO ! ! Check if diagnostics variables are available in input NetCDF file. ! IF (.not.got_var(idtime)) THEN IF (Master) WRITE (stdout,60) TRIM(Vname(1,idtime)), & & TRIM(ncname) exit_flag=3 RETURN END IF # ifdef DIAGNOSTICS_UV DO ivar=1,NDM2d ifield=idDu2d(ivar) IF (.not.got_var(ifield).and.Dout(ifield,ng)) THEN IF (Master) WRITE (stdout,60) TRIM(Vname(1,ifield)), & & TRIM(ncname) exit_flag=3 RETURN END IF ifield=idDv2d(ivar) IF (.not.got_var(ifield).and.Dout(ifield,ng)) THEN IF (Master) WRITE (stdout,60) TRIM(Vname(1,ifield)), & & TRIM(ncname) exit_flag=3 RETURN END IF END DO # ifdef SOLVE3D DO ivar=1,NDM3d ifield=idDu3d(ivar) IF (.not.got_var(ifield).and.Dout(ifield,ng)) THEN IF (Master) WRITE (stdout,60) TRIM(Vname(1,ifield)), & & TRIM(ncname) exit_flag=3 RETURN END IF ifield=idDv3d(ivar) IF (.not.got_var(ifield).and.Dout(ifield,ng)) THEN IF (Master) WRITE (stdout,60) TRIM(Vname(1,ifield)), & & TRIM(ncname) exit_flag=3 RETURN END IF END DO # endif # endif # ifdef DIAGNOSTICS_TS DO itrc=1,NT(ng) DO ivar=1,NDT ifield=idDtrc(itrc,ivar) IF (.not.got_var(ifield).and.Dout(ifield,ng)) THEN IF (Master) WRITE (stdout,60) TRIM(Vname(1,ifield)), & & TRIM(ncname) exit_flag=3 RETURN END IF END DO END DO # endif # ifdef DIAGNOSTICS_BIO # if defined BIO_FENNEL || defined HYPOXIA_SRM DO ivar=1,NDbio2d ifield=iDbio2(ivar) IF (.not.got_var(ifield).and.Dout(ifield,ng)) THEN IF (Master) WRITE (stdout,60) TRIM(Vname(1,ifield)), & & TRIM(ncname) exit_flag=3 RETURN END IF END DO # endif # if defined BIO_FENNEL DO ivar=1,NDbio3d ifield=iDbio3(ivar) IF (.not.got_var(ifield).and.Dout(ifield,ng)) THEN IF (Master) WRITE (stdout,60) TRIM(Vname(1,ifield)), & & TRIM(ncname) exit_flag=3 RETURN END IF END DO # endif # endif ! ! Set unlimited time record dimension to the appropriate value. ! IF (nRST(ng).eq.nDIA(ng)) THEN IF (ndefDIA(ng).gt.0) THEN DIA(ng)%Rindex=((ntstart(ng)-1)- & & ndefDIA(ng)*((ntstart(ng)-1)/ndefDIA(ng)))/ & & nDIA(ng) ELSE DIA(ng)%Rindex=(ntstart(ng)-1)/nDIA(ng) END IF ELSE DIA(ng)%Rindex=rec_size END IF END IF QUERY ! ! Set initial averaged time. ! IF (ntsDIA(ng).eq.1) THEN DIAtime(ng)=time(ng)-0.5_r8*REAL(nDIA(ng),r8)*dt(ng) ELSE DIAtime(ng)=time(ng)+REAL(ntsDIA(ng),r8)*dt(ng)- & & 0.5_r8*REAL(nDIA(ng),r8)*dt(ng) END IF ! 10 FORMAT (6x,'DEF_DIAGS - creating diagnostics', t43, & & ' file, Grid ',i2.2,': ', a) 20 FORMAT (6x,'DEF_DIAGS - inquiring diagnostics', t43, & & ' file, Grid ',i2.2,': ', a) 30 FORMAT (/,' DEF_DIAGS - unable to create diagnostics NetCDF', & & ' file: ',a) 40 FORMAT (1pe11.4,1x,'millimeter') 50 FORMAT (/,' DEF_DIAGS - unable to open diagnostics NetCDF', & & ' file: ',a) 60 FORMAT (/,' DEF_DIAGS - unable to find variable: ',a,2x, & & ' in diagnostics NetCDF file: ',a) RETURN END SUBROUTINE def_diags #else SUBROUTINE def_diags RETURN END SUBROUTINE def_diags #endif